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Academician

BESTE ÇALIMLIOĞLU

Doçent

Marmara Üniversitesi Mühendislik Fakültesi Biyomühendislik Bölümü

Research topics OpenAlex
  1. Ana Dal Mühendislik Temel Alanı
  2. Yan Dal Biyomühendislik
Keywords YÖKSİS
Articles 44 YÖKSİS 44 · OpenAlex 0 Total citations 1,445 h-index 20 · OpenAlex OpenAlex coverage %93 matched 41 / 44 Q1 articles 18 Scopus · WoS Q1 10 Best field rank #1,349 / 24,860 Main field · top 5.4% Co-authors 103 15 Turkish institutions

Citation impact

Citation counts of the articles matched in OpenAlex, citing publications from Crossref and the Stanford/Elsevier list. Sources are shown separately and never added up.

OpenAlex YÖKSİS articles matched in OpenAlex: 41 + YÖKSİS · co-author record: 4
h-index 20 Percentile in Türkiye: 97 #64 of 2,222 at their university by h-index
i10-index
23
Total citations
1,445
Top 3.1% in Türkiye
Per article
32.1
FWCI
2.11
1.00 = world average
World top 1%
0
World top 10%
17

Most cited articles

  1. Network-based approach to identify molecular signatures and therapeutic agents in Alzheimer’s disease 2019 world top 10% 120 citations
  2. Drug Repositioning for Effective Prostate Cancer Treatment 2018 world top 10% 108 citations
  3. Impact of SRT on the efficiency and microbial community of sequential anaerobic and aerobic membrane bioreactors for the treatment of textile industry wastewater 2017 world top 10% 101 citations
How is this computed?

h-index and citations are computed from the citation counts of this academic’s YÖKSİS articles matched in OpenAlex (not Google Scholar, WoS or Scopus). Unmatched articles are not included. 4 articles (99 citations) tagged with this academic’s YÖK author id in co-authors’ YÖKSİS records count only towards citations, h-index and i10; article counts, percentiles and rankings use their own YÖKSİS list.

Citing publications Crossref 366 publications citing 43 DOI-bearing articles · 62 Türkiye-affiliated
  • 2018 3
  • 2019 67
  • 2020 95
  • 2021 140
  • 2022 40
  • 2023 1
  • 2024 1
  • 2025 12
  • 2026 7
  1. The determination of the potential anticancer effects of ruthenium (Ru) arene complexes in PC-3, Du-145, and LNCaP prostate cancer cell lines TR Seda Sabah Özcan et al. · Inorganic Chemistry Communications · 2026
  2. DOI 10.1152/ajplung.00030.2025 2026
  3. DOI 10.1007/s00204-026-04327-w 2026
  4. DOI 10.1016/j.parkreldis.2025.108149 2026
  5. DOI 10.1016/b978-0-443-33459-7.00012-0 2026
  6. DOI 10.1016/j.ejmech.2025.118330 2026
  7. DOI 10.1016/b978-0-443-27496-1.00017-8 2026
  8. DOI 10.1371/journal.pone.0329056 2025
  9. DOI 10.3389/fonc.2025.1669213 2025
  10. DOI 10.18203/2320-6012.ijrms20253950 2025
  11. DOI 10.61882/ibj.5178 2025
  12. DOI 10.1007/s10571-025-01630-5 2025
  13. DOI 10.3389/fgene.2025.1721716 2025
  14. DOI 10.64898/2025.12.09.693222 2025
  15. DOI 10.1177/15578100251392371 2025
  16. DOI 10.3390/ijms262010127 2025
  17. DOI 10.3892/ol.2025.15430 2025
  18. DOI 10.3390/ijms262211238 2025
  19. DOI 10.1002/advs.202500852 2025
  20. DOI 10.15407/dopovidi2019.04.086 2024
  21. DOI 10.1109/tcbb.2021.3138142 2023
  22. Systems biomarkers for papillary thyroid cancer prognosis and treatment through multi-omics networks TR Gizem Gulfidan et al. · Archives of Biochemistry and Biophysics · 2022 · cites 5 articles of this academic
  23. Prediction of drug candidates for clear cell renal cell carcinoma using a systems biology-based drug repositioning approach TR Xiangyu Li et al. · eBioMedicine · 2022
  24. A Gene Co-Expression Network-Based Drug Repositioning Approach Identifies Candidates for Treatment of Hepatocellular Carcinoma TR Meng Yuan et al. · Cancers · 2022
  25. Drug repurposing for rheumatoid arthritis: Identification of new drug candidates via bioinformatics and text mining analysis TR Ulku Unal et al. · Autoimmunity · 2022
  26. Forecasting Gastric Cancer Diagnosis, Prognosis, and Drug Repurposing with Novel Gene Expression Signatures TR Talip Yasir Demirtas et al. · OMICS: A Journal of Integrative Biology · 2022
  27. Past, Present, and Future of Therapies for Pituitary Neuroendocrine Tumors: Need for Omics and Drug Repositioning Guidance TR Busra Aydin et al. · OMICS: A Journal of Integrative Biology · 2022 · cites 6 articles of this academic
  28. DOI 10.3389/fcell.2022.787995 2022
  29. DOI 10.1126/sciadv.abm2059 2022
  30. DOI 10.1007/s00280-021-04386-z 2022

Showing the 30 most recent.

Where does this list come from?

Extracted from the reference lists in Crossref’s public March 2026 data file; 20.3% of the file has been processed, so the list may be incomplete. Crossref citations are never added to or compared with the OpenAlex citation counts; the two sources have different coverage.

Field ranking

Position in the main-field, side-field and keyword cohorts by YÖKSİS article score; each card opens that ranking.

YÖKSİS ?
Keyword rankings 2

Works 44

YÖKSİS and OpenAlex records: index distribution, journals published in, a filterable article list and the other output types.

Indexes and citation percentiles

?
TR Index 1 articles
OpenAlex citation percentile
Top 1%0
Top 10%15
Avg · n 40 %74.3
Other counts

Scopus (SJR)

  • YÖKSİS rows 42

WoS (JCR)

  • YÖKSİS rows 42

Articles

Articles with YÖKSİS and OpenAlex source split; narrow by quartile or TR Index.

44articles

Journals with publications

33 journals

Narrow down

Scopus (SJR)
Q118 Q219 Q34 Q41
WoS (JCR)
Q110 Q222 Q38 Q42
TR Index
1articles

Article list

  1. 2026 Tissue-Specific Multi-Omics Integration Demonstrates Molecular Signatures Connecting Obesity to Immune Vulnerability Metabolites DOI 10.3390/metabo16020095 YÖKSİS SJR Q2 JCR Q2 OpenAlex 6.0%
  2. 2026 Prolonged Deltamethrin Exposure Induces Dose-Dependent Glycerol Overproduction and Efficient Deltamethrin Removal by Saccharomyces cerevisiae Metabolites DOI 10.3390/metabo16050305 YÖKSİS SJR Q2 JCR Q2 OpenAlex 30.7%
  3. 2025 Gaining Biological Insights Into Deltamethrin‐Induced Toxicity and Resistance at the Molecular Level Journal of Biochemical and Molecular Toxicology DOI 10.1002/jbt.70469 YÖKSİS SJR Q2 JCR Q2 OpenAlex 77.4%
  4. 2025 The Construction of ceRNA Regulatory Network Unraveled Prognostic Biomarkers and Repositioned Drug Candidates for the Management of Pancreatic Ductal Adenocarcinoma Current Issues in Molecular Biology DOI 10.3390/cimb47070496 YÖKSİS SJR Q2 JCR Q2 OpenAlex 65.6%
  5. 2024 Correction to: Integrated systems biology analysis of acute lymphoblastic leukemia: unveiling molecular signatures and drug repurposing opportunities Annals of Hematology DOI 10.1007/s00277-024-05881-y YÖKSİS SJR Q2 JCR Q2
  6. 2024 Genome-scale metabolic models in translational medicine: the current status and potential of machine learning in improving the effectiveness of the models Molecular Omics DOI 10.1039/D3MO00152K YÖKSİS SJR Q2 JCR Q3 OpenAlex 76.5%
  7. 2024 Comparative analysis of diisononyl phthalate and di(isononyl)cyclohexane‐1,2 dicarboxylate plasticizers in regulation of lipid metabolism in 3T3‐L1 cells Environmental Toxicology DOI 10.1002/tox.24010 YÖKSİS SJR Q2 JCR Q2 OpenAlex 71.3%
  8. 2024 DCDA: CircRNA–Disease Association Prediction with Feed-Forward Neural Network and Deep Autoencoder Interdisciplinary Sciences: Computational Life Sciences DOI 10.1007/s12539-023-00590-y YÖKSİS SJR Q2 JCR Q1 OpenAlex 61.4%
  9. 2023 Drug repositioning via host-pathogen protein-protein interactions for the treatment of cervical cancer Frontiers in Oncology DOI 10.3389/fonc.2023.1096081 YÖKSİS SJR Q2 JCR Q2 OpenAlex 74.7%
  10. 2023 Idiopathic Pulmonary Fibrosis Molecular Substrates Revealed by Competing Endogenous RNA Regulatory Networks OMICS: A Journal of Integrative Biology DOI 10.1089/omi.2023.0072 YÖKSİS SJR Q2 JCR Q3 OpenAlex 58.7%
  11. 2023 Epigenomic and transcriptomic landscaping unraveled candidate repositioned therapeutics for non-functioning pituitary neuroendocrine tumors Journal of Endocrinological Investigation DOI 10.1007/s40618-022-01923-2 YÖKSİS SJR Q2 JCR Q2 OpenAlex 75.6%
  12. 2023 Decoding Systems Biology of Inflammation Signatures in Cancer Pathogenesis: Pan-cancer Insights from 12 Common Cancers OMICS: A Journal of Integrative Biology DOI 10.1089/omi.2023.0127 YÖKSİS SJR Q2 JCR Q3 OpenAlex 67.0%
  13. 2022 Acute Myeloid Leukemia: New Multiomics Molecular Signatures and Implications for Systems Medicine Diagnostics and Therapeutics Innovation OMICS: A Journal of Integrative Biology DOI 10.1089/omi.2022.0051 YÖKSİS SJR Q2 JCR Q2 OpenAlex 82.0%
  14. 2022 Systems biomarkers for papillary thyroid cancer prognosis and treatment through multi-omics networks Archives of Biochemistry and Biophysics DOI 10.1016/j.abb.2021.109085 YÖKSİS SJR Q1 JCR Q1 OpenAlex 84.9%
  15. 2022 Past, Present, and Future of Therapies for Pituitary Neuroendocrine Tumors: Need for Omics and Drug Repositioning Guidance OMICS: A Journal of Integrative Biology DOI 10.1089/omi.2021.0221 YÖKSİS SJR Q2 JCR Q2 OpenAlex 67.2%
  16. 2022 Repositioning of Anti-Inflammatory Drugs for the Treatment of Cervical Cancer Sub-Types FRONTIERS IN PHARMACOLOGY DOI 10.3389/fphar.2022.884548 YÖKSİS SJR Q1 JCR Q1 OpenAlex top 10% OpenAlex 92.5%
  17. 2022 Prospects of integrated multi-omics-driven biomarkers for efficient hair loss therapy from systems biology perspective GENE REPORTS DOI 10.1016/j.genrep.2022.101657 YÖKSİS SJR Q4 JCR Q4 OpenAlex 59.9%
  18. 2021 The Repertoire of Glycan Alterations and Glycoproteins in Human Cancers OMICS: A Journal of Integrative Biology DOI 10.1089/omi.2020.0210 YÖKSİS SJR Q2 JCR Q2 OpenAlex 52.7%
  19. 2021 Systems-level biomarkers identification and drug repositioning in colorectal cancer World Journal of Gastrointestinal Oncology DOI 10.4251/wjgo.v13.i7.638 YÖKSİS SJR Q2 JCR Q3 OpenAlex 57.3%
  20. 2021 Systems biology based drug repositioning for development of cancer therapy SEMINARS IN CANCER BIOLOGY DOI 10.1016/j.semcancer.2019.09.020 YÖKSİS SJR Q1 JCR Q1 OpenAlex top 10% OpenAlex 93.9%

Projects 17 See all (17) →

  1. 2018 Evsel atıklardan biyoetanol üretim sürecinde enerji ve enzim sarfiyatının optimizasyonu Yükseköğretim Kurumları tarafından destekli bilimsel araştırma projesi · Tamamlandı 2018-05-07 – 2019-07-05
  2. 2017 Hesaplamalı Sistem Biyolojisi Yaklaşımı Ile Kanser Ilintili Işaretçi Moleküllerin Tespiti Ve Haritalanması TÜBİTAK PROJESİ · Tamamlandı 2017-04-15 – 2018-04-15
  3. 2013 Elementel Kükürt Bazlı Ototrofik ve Miksotrofik Denitrifikasyon Performansının Membran Biyoreaktörlerde İncelenmesi Yükseköğretim Kurumları tarafından destekli bilimsel araştırma projesi · Tamamlandı 2013-03-08 – 2014-04-17
  4. 2022 Pestisitlerin mayalar üzerindeki toksisitesinin moleküler düzeyde araştırılması Yükseköğretim Kurumları tarafından destekli bilimsel araştırma projesi · Tamamlandı 2022-11-04
  5. 2023 Pediatrik retinoblastomanın erken tanısı için biyolojik ağ modellemesi ve ilaç yeniden Yükseköğretim Kurumları tarafından destekli bilimsel araştırma projesi · Tamamlandı 2023-07-13

Books 7 See all (7) →

  1. 2025 INTERNATIONAL RESEARCH AND EVALUATIONS IN THE FIELD OF BIOENGINEERING Gece Kitaplığı ISBN 978-625-388-782-7 Kitap Bölümü · Bilimsel Kitap
  2. 2025 INTERNATIONAL RESEARCH AND EVALUATIONS IN THE FIELD OF BIOENGINEERING Gece Kitaplığı ISBN 978-625-388-782-7 Kitap Bölümü · Bilimsel Kitap
  3. 2025 Advances in life sciences and biotechnology: Bridging innovation and discovery Biyomit ISBN 978-625-93516-0-5 Kitap Bölümü · Bilimsel Kitap
  4. 2021 PROTEİN: YAPISI, MÜHENDİSLİĞİ, ETKİLEŞİMLERİ, DİNAMİĞİ VE İLAÇ TASARIMINDAKİ YERİ Ankara Nobel Tıp Kitabevleri ISBN 9786257564038 Kitap Bölümü · Bilimsel Kitap
  5. 2019 In Silico Drug Design Methods for Drug Repurposing ELSEVIER ISBN 9780128161258 Kitap Bölümü · Bilimsel Kitap

Proceedings 35 See all (35) →

  1. 2022 Network Based Integration of Multi-Omic Profiles to Purpose New Biomarker Candidates in Pancreatic Cancer 5th International Eurasian Conference on Biological ad Chemical Sciences (EurasianBioChem))
  2. — EXPOSURE TO DI(ISONONYL) CYCLOHEXANE-1,2-DICARBOXYLATE ALTERS THE EXPRESSION OF GROWTH-RELATED GENES IN ZEBRAFISH 8. INTERNATIONAL FOOD, AGRICULTURE AND VETERINARY SCIENCES CONGRESS
  3. — TARGETING MYELINATION PROCESS IN NEURODEGENERATIVE DISEASES THROUGH SYSTEMS BIOLOGY III.INTERNATIONAL CONGRESS ON ADVANCED RESEARCH AND APPLICATIONS
  4. 2021 Novel Systems Biomarker Candidates with High Diagnostic and Prognostic Performance in Esophageal Squamous Cell Carcinoma 3rd EURASIA BIOCHEMICAL APPROACHES & TECHNOLOGIES (EBAT) CONGRESS
  5. 2021 Differential Interactome Based Drug Repositioning Unraveled Potential Therapeutics for Colorectal Cancers 3rd EURASIA BIOCHEMICAL APPROACHES & TECHNOLOGIES (EBAT) CONGRESS

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Collaboration network

From the author lists of YÖKSİS publication records. Duplicate records of a work count once; institutions are co-authors’ current YÖKSİS affiliations.

Co-authors
103
With an akaturk profile
25
Turkish institutions
15
Co-authored works
%95

Academic co-authors 25

  1. KAZIM YALÇIN ARGA Profesör · Marmara Üniversitesi same university 27
  2. CEYHUN BEREKETOĞLU Doçent · Marmara Üniversitesi same university 5
  3. BÜŞRA AYDIN Doçent · Konya Gıda Ve Tarım Üniversitesi 4
  4. ERKAN ŞAHİNKAYA Profesör · Marmara Üniversitesi same university 4
  5. ESRA GÖV Doçent · Adana Alparslan Türkeş Bilim Ve Teknoloji Üniversitesi 4
  6. ADEM YURTSEVER Doçent · İstanbul Üniversitesi-Cerrahpaşa 3
  7. BETÜL YILMAZ Profesör · Marmara Üniversitesi same university 3
  8. FATİH BAYRAKLI Profesör · Marmara Üniversitesi same university 2
  9. HASAN TÜRKEZ Profesör · Atatürk Üniversitesi 2
  10. PEMRA ÖZBEK SARICA Profesör · Marmara Üniversitesi same university 2
Show all (25)
  1. TUBA SEVİMOĞLU Doçent · Sağlık Bilimleri Üniversitesi 2
  2. BETÜL BOZ Doçent · Marmara Üniversitesi same university 1
  3. BETÜL BUDAK Araştırma Görevlisi · Marmara Üniversitesi same university 1
  4. BETÜL GÖNCÜ Araştırma Görevlisi · Harran Üniversitesi 1
  5. BÜŞRA AYDIN Öğretim Görevlisi (ders Vermekle Görevli) · Kırşehir Ahi Evran Üniversitesi 1
  6. CAN ERZİK Doktor Öğretim Üyesi · Marmara Üniversitesi same university 1
  7. CEYDA KULA Doktor Öğretim Üyesi · Marmara Üniversitesi same university 1
  8. DENİZ UÇAR Profesör · Bursa Teknik Üniversitesi 1
  9. EMİNE ÇOKGÖR Profesör · İstanbul Teknik Üniversitesi 1
  10. MESUT GÖRÜR Doçent · Bursa Uludağ Üniversitesi 1
  11. SÜHEYLA BOZKURT Profesör · İstinye Üniversitesi 1
  12. YASEMİN TOKER NARİN Öğretim Görevlisi (uygulamalı Birim) · İstanbul Medeniyet Üniversitesi 1
  13. YAĞMUR KİRAZ DURMAZ Doktor Öğretim Üyesi · İzmir Ekonomi Üniversitesi 1
  14. ÖZER ÇINAR Profesör · Yıldız Teknik Üniversitesi 1
  15. ÖZLEM ATEŞ DURU Doktor Öğretim Üyesi · Yeditepe Üniversitesi 1

National collaboration 15 institutions

Within own university36 joint works · Marmara Üniversitesi

  1. Adana Alparslan Türkeş Bilim Ve Teknoloji Üniversitesi 4 works · 1 academics
  2. Konya Gıda Ve Tarım Üniversitesi 4 works · 1 academics
  3. İstanbul Üniversitesi-Cerrahpaşa 3 works · 1 academics
  4. Atatürk Üniversitesi 2 works · 1 academics
  5. Sağlık Bilimleri Üniversitesi 2 works · 1 academics
  6. Bursa Teknik Üniversitesi 1 works · 1 academics
  7. Bursa Uludağ Üniversitesi 1 works · 1 academics
  8. Harran Üniversitesi 1 works · 1 academics
  9. Kırşehir Ahi Evran Üniversitesi 1 works · 1 academics
  10. Yeditepe Üniversitesi 1 works · 1 academics
Show all (15)
  1. Yıldız Teknik Üniversitesi 1 works · 1 academics
  2. İstanbul Medeniyet Üniversitesi 1 works · 1 academics
  3. İstanbul Teknik Üniversitesi 1 works · 1 academics
  4. İstinye Üniversitesi 1 works · 1 academics
  5. İzmir Ekonomi Üniversitesi 1 works · 1 academics

Other co-authors (incl. international) 78

Gizem Gulfidan 12Adil Mardinoğlu 8Hande Beklen 8Medi Kori 6Raghu Sinha 6Tania Islam 4mathias uhlen 4Özge Önlütürk Aydoğan 4Esra Yildirim 3Jan Boren 3KUBRA KARAGOZ 3Md Rezanur Rahman 3Mohammad Ali Moni 3Cheng Zhang 2JENS NIELSEN 2MUSTAFA YAVUZ 2Md Nurul Mollah 2NURDAN KELEŞOĞLU 2REZANUR RAHMAN 2Recep Anıl Kaya 2Woonghee Kim 2AYŞE SERAP KARADAĞAdem KılıçAjay PradhanAs BramantiAysegul Caliskan İscanAytaç Dursun OksuzogluBetul Karademir YilmazBuse CalogluDamla DemirelDilan Nisa YılmazDilara AyyildizElif KilicEzgi Yagmur TukelFr NicolettiFulya KucukalpGholemreza BidkhoriGurudeeban SelvarajHACER TURGUTHabib Burak Can Erdonmez

Show all (78)

Hakime Gül YavuzHossain Md FaruqueeIndu SinhaIpek EsenIsabel HäggblomJen NielsenKajetan JuszczakKeziban OkutanLe WuMC PetraliaMD ANWARUL HAQUEMOLLAH MD NURUL HAQUEMR IslamMd Mafizur RahmanMelisa SoyluMohammd ShahjamanMorten GrotliMu ShahjamanMuhammad ArifMuhammed Fatih KırcalıNilufa Akhter BanuOnur ErdoganOrhan ErenOzlem AltayPa FagoneRa CiurleoRanjan Kumar NandaRui BenfeitasSAİME İSMET GÜRHANSULTAN GÜLÇE İZSeishi OgawaSema ArslanUmut ÇetinXiangyu LiYi SunYusuke SatoZaman Toyfiquzmichael gatza

Authors without an akaturk profile (international researchers, retired or former academics, students, clinicians) are grouped by name spelling; short forms such as “Gulluce M.” join the single full name they match.