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Academician

SİNEM KOÇER

Doktor Öğretim Üyesi

İstanbul Yeni Yüzyıl Üniversitesi Eczacılık Fakültesi Eczacılık Teknolojisi Bölümü

Research topics OpenAlex
  1. Ana Dal Mühendislik Temel Alanı
  2. Yan Dal Biyomühendislik
Keywords YÖKSİS
Articles 18 YÖKSİS 18 · OpenAlex 0 Total citations 142 h-index 7 · OpenAlex OpenAlex coverage %94 matched 17 / 18 Q1 articles 5 Scopus · WoS Q1 6 Best field rank #6,777 / 24,860 Main field · top 27.3% Co-authors 35 8 Turkish institutions

Citation impact

Citation counts of the articles matched in OpenAlex, citing publications from Crossref and the Stanford/Elsevier list. Sources are shown separately and never added up.

OpenAlex YÖKSİS articles matched in OpenAlex: 17 + YÖKSİS · co-author record: 2
h-index 7 Percentile in Türkiye: 67 #49 of 268 at their university by h-index
i10-index
2
Total citations
142
Top 38% in Türkiye
Per article
7.5
FWCI
0.85
1.00 = world average
World top 1%
0
World top 10%
2

Most cited articles

  1. Evaluation of the potency of FDA-approved drugs on wild type and mutant SARS-CoV-2 helicase (Nsp13) 2020 world top 10% 44 citations
  2. Targeting SARS-CoV-2 Nsp12/Nsp8 interaction interface with approved and investigational drugs: an in silico structure-based approach 2020 27 citations
  3. Biochemical and in silico Characterization of Recombinant L-Lactate Dehydrogenase of Theileria annulata 2016 9 citations
How is this computed?

h-index and citations are computed from the citation counts of this academic’s YÖKSİS articles matched in OpenAlex (not Google Scholar, WoS or Scopus). Unmatched articles are not included. 2 articles (50 citations) tagged with this academic’s YÖK author id in co-authors’ YÖKSİS records count only towards citations, h-index and i10; article counts, percentiles and rankings use their own YÖKSİS list.

Citing publications Crossref 19 publications citing 17 DOI-bearing articles · 6 Türkiye-affiliated
  • 2019 4
  • 2020 3
  • 2021 9
  • 2022 3
  1. Heterologous expression, biochemical characterisation and computational analysis of Bacteroides fragilis enolase TR Erennur Ugurel et al. · Computational Biology and Chemistry · 2022
  2. DOI 10.2174/1570180819666220314094820 2022
  3. DOI 10.2174/1389201022666210421102513 2022
  4. In vitro inhibition studies of coumarin derivatives on Bos taurus enolase and elucidating their interaction by molecular docking, molecular dynamics simulations and MMGB(PB)SA binding energy calculation TR Emrah Sariyer et al. · Bioorganic Chemistry · 2021 · cites 2 articles of this academic
  5. Identification of potential inhibitors of Trichomonas vaginalis iron-containing superoxide dismutase by computer-aided drug design approach TR Sinem Kocer et al. · Structural Chemistry · 2021
  6. DOI 10.1016/j.enzmictec.2021.109814 2021
  7. DOI 10.3390/pathogens10121614 2021
  8. DOI 10.1080/17460441.2021.1909566 2021
  9. DOI 10.1007/s13258-021-01119-7 2021
  10. DOI 10.3389/fgene.2021.626642 2021
  11. DOI 10.1109/bibm52615.2021.9669641 2021
  12. DOI 10.1080/07391102.2021.2000498 2021
  13. Computational characterisation ofToxoplasma gondiiFabG (3-oxoacyl-[acyl-carrier-protein] reductase): a combined virtual screening and all-atom molecular dynamics simulation study TR Can Aygün et al. · Journal of Biomolecular Structure and Dynamics · 2020
  14. DOI 10.1101/2020.11.01.363788 2020
  15. DOI 10.1186/s12931-020-01581-z 2020
  16. Discovery and evaluation of inhibitory activity and mechanism of arylcoumarin derivatives on Theileria annulata enolase by in vitro and molecular docking studies TR Sinem Yakarsonmez et al. · Molecular Diversity · 2019 · cites 2 articles of this academic
  17. Functional analyses of dipeptide and pentapeptide insertions on Theileria annulata enolase by site-directed mutagenesis and in silico approaches TR Sinem Yakarsonmez et al. · Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics · 2019
  18. DOI 10.1016/j.pep.2019.105461 2019
  19. DOI 10.1021/acscatal.9b03249 2019 · cites 2 articles of this academic
Where does this list come from?

Extracted from the reference lists in Crossref’s public March 2026 data file; 20.3% of the file has been processed, so the list may be incomplete. Crossref citations are never added to or compared with the OpenAlex citation counts; the two sources have different coverage.

Field ranking

Position in the main-field, side-field and keyword cohorts by YÖKSİS article score; each card opens that ranking.

YÖKSİS ?
Keyword rankings 3

Works 18

YÖKSİS and OpenAlex records: index distribution, journals published in, a filterable article list and the other output types.

Indexes and citation percentiles

?
TR Index 0 articles
OpenAlex citation percentile
Top 1%0
Top 10%1
Avg · n 17 %56.6
Other counts

Scopus (SJR)

  • YÖKSİS rows 18

WoS (JCR)

  • YÖKSİS rows 18

Articles

Articles with YÖKSİS and OpenAlex source split; narrow by quartile or TR Index.

18articles

Journals with publications

14 journals

Narrow down

Scopus (SJR)
Q15 Q27 Q36 Q40
WoS (JCR)
Q16 Q24 Q36 Q42
TR Index
0articles

Article list

  1. 2025 Expression, Purification and Biochemical Characterisation of Babesia bigemina Lactate Dehydrogenase Molecular Biotechnology DOI 10.1007/s12033-025-01500-x YÖKSİS SJR Q2 JCR Q3 OpenAlex 17.9%
  2. 2025 Nanotechnology-driven enhancement and modulation of immune responses in monkeypox and respiratory syncytial virus nanovaccine research Colloids and Surfaces B: Biointerfaces DOI 10.1016/j.colsurfb.2025.114829 YÖKSİS SJR Q1 JCR Q1 OpenAlex 80.6%
  3. 2025 Straightforward fabrication of bioactive polymeric surfaces for bacterial immobilization Journal of Macromolecular Science, Part A DOI 10.1080/10601325.2025.2589931 YÖKSİS SJR Q3 JCR Q3 OpenAlex 44.4%
  4. 2024 Public health challenges after the February 6 earthquakes: A comprehensive review of immediate and long-term impacts in Türkiye International Journal of Disaster Risk Reduction DOI 10.1016/j.ijdrr.2024.104925 YÖKSİS SJR Q1 JCR Q1 OpenAlex top 10% OpenAlex 94.2%
  5. 2023 Identification of novel compounds against Acinetobacter baumannii 3-oxoacyl-[acyl-carrier-protein] synthase I (FabB) via comprehensive structure-based computational approaches Elsevier BV DOI 10.1016/j.jmgm.2023.108565 YÖKSİS SJR Q2 JCR Q1 OpenAlex 53.0%
  6. 2023 Heterologous expression, purification, and partial characterisation of the apicoplast protein 3-oxoacyl-[acyl-carrier-protein] reductase from Toxoplasma gondii Elsevier BV DOI 10.1016/j.pep.2022.106187 YÖKSİS SJR Q3 JCR Q4 OpenAlex 58.4%
  7. 2022 Heterologous expression, biochemical characterisation and computational analysis of Bacteroides fragilis enolase Computational Biology and Chemistry DOI 10.1016/j.compbiolchem.2022.107658 YÖKSİS SJR Q2 JCR Q2 OpenAlex 39.0%
  8. 2021 Identification of potential inhibitors of Trichomonas vaginalis iron-containing superoxide dismutase by computer-aided drug design approach Structural Chemistry DOI 10.1007/s11224-021-01766-2 YÖKSİS SJR Q3 JCR Q3 OpenAlex 2.1%
  9. 2021 In vitro inhibition studies of coumarin derivatives on Bos taurus enolase and elucidating their interaction by molecular docking, molecular dynamics simulations and MMGB(PB)SA binding energy calculation Bioorganic Chemistry DOI 10.1016/j.bioorg.2021.104796 YÖKSİS SJR Q2 JCR Q1 OpenAlex 65.9%
  10. 2020 Hit identification against peptidyl-prolyl isomerase of Theileria annulata by combined virtual high-throughput screening and molecular dynamics simulation approach Computational Biology and Chemistry DOI https://linkinghub.elsevier.com/retrieve/pii/S147692712030596X YÖKSİS SJR Q3 JCR Q2 OpenAlex 57.0%
  11. 2020 Targeting SARS-CoV-2 Nsp12/Nsp8 interaction interface with approved and investigational drugs: an in silico structure-based approach Journal of Biomolecular Structure and Dynamics DOI 10.1080/07391102.2020.1819882 YÖKSİS SJR Q3 JCR Q2 OpenAlex 79.4%
  12. 2020 Discovery and evaluation of inhibitory activity and mechanism of arylcoumarin derivatives on Theileria annulata enolase by in vitro and molecular docking studies MOLECULAR DIVERSITY DOI 10.1007/s11030-019-10018-9 YÖKSİS SJR Q2 JCR Q2 OpenAlex 70.9%
  13. 2020 Evaluation of the potency of FDA-approved drugs on wild type and mutant SARS-CoV-2 helicase (Nsp13) International Journal of Biological Macromolecules DOI https://linkinghub.elsevier.com/retrieve/pii/S0141813020344974 YÖKSİS SJR Q1 JCR Q1
  14. 2019 Functional analyses of dipeptide and pentapeptide insertions on Theileria annulata enolase by site-directed mutagenesis and in silico approaches BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS DOI 10.1016/j.bbapap.2019.05.006 YÖKSİS SJR Q1 JCR Q3 OpenAlex 46.2%
  15. 2018 A study of Bos taurus muscle specific enolase biochemical characterization, homology modelling and investigation of molecular interaction using molecular docking and dynamics simulations INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES DOI 10.1016/j.ijbiomac.2018.08.184 YÖKSİS SJR Q1 JCR Q1 OpenAlex 45.4%
  16. 2016 Biochemical and in silico Characterization of Recombinant L-Lactate Dehydrogenase of Theileria annulata MOLECULAR BIOTECHNOLOGY DOI 10.1007/s12033-016-9924-3 YÖKSİS SJR Q2 JCR Q3 OpenAlex 62.3%
  17. 2016 Comprehensive structural analysis of the open and closed conformations of Theileria annulata enolase by molecular modelling and docking COMPUTATIONAL BIOLOGY AND CHEMISTRY DOI 10.1016/j.compbiolchem.2016.06.002 YÖKSİS SJR Q2 JCR Q3 OpenAlex 77.1%
  18. 2016 Cloning, Expression and Characterization of the Gene Encoding the Enolase from Fusobacterium nucleatum APPLIED BIOCHEMISTRY AND MICROBIOLOGY DOI 10.1134/S0003683816010142 YÖKSİS SJR Q3 JCR Q4 OpenAlex 68.3%

Projects 7 See all (7) →

  1. 2023 In silico olarak tespit edilecek T. annulata laktat dehidrogenaz inhibitörlerinin in vitro olarak değerlendirilmesi Yükseköğretim Kurumları tarafından destekli bilimsel araştırma projesi · Tamamlandı 2023-05-16 – 2025-05-02
  2. 2023 Gypsophila pallida Stapf. ve Endemik Gypsophila tuberculosa Hub.-Mor. Taksonlarından Asetilkolinesteraz (AChE) ve Bütirilkolinesteraz (BChE) Aktivite Yönlendirmeli Aktif Bileşiklerin İzolasyonu TÜSEB · Tamamlandı 2023-08-01 – 2024-08-15
  3. 2021 Neisseria Gonorrhoeae DXR'sini Hedefleyen Yeni İnhibitörler Diğer (Uluslararası) · Tamamlandı 2021-11-01 – 2024-10-01
  4. 2021 Helicobacter pylori enfeksiyonu için ilaç hedefi olarak FabI'nın rekombinant olarak eldesi ve analizi Yükseköğretim Kurumları tarafından destekli bilimsel araştırma projesi · Tamamlandı 2021-04-22 – 2022-10-03
  5. 2018 Bacteriodes fragilis Enolazının in vitro ve in silico Analizi Yükseköğretim Kurumları tarafından destekli bilimsel araştırma projesi · Tamamlandı 2018-05-18 – 2020-03-18

Proceedings 31 See all (31) →

  1. — Salmonella enteritidis UDP-N-asetilglukozamin 1-karboksiviniltransferaz (MurA)’ının farklı homoloji modellerinin karşılaştırılması 7th International Eurasian Conference on Biological and Chemical Sciences (EurasianBioChem 2024)
  2. 2025 Elektrosprey ve 3B Biyoyazıcı Yöntemleri ile Cinchona Ekstresi ve Arap Zamkı İçeren Fonksiyonel Yara Örtülerinin Geliştirilmesi 6th International Eurasian Conference on Science, Engineering and Technology (EurasianSciEnTech 2025)
  3. 2025 Aspergillus fumigatus ERG6 Protein Modelinin Antifungal Ajanlarla Moleküler Etkileşim Analizi 6th International Eurasian Conference on Science, Engineering and Technology (EurasianSciEnTech 2025)
  4. 2018 Cloning, heterologous expression and purification of Toxoplasma gondii FabG (3-oxoacyl-[acyl-carrier-protein] reductase) enzyme 1.Euroasia Biochemical Approaches Technologies Congress (EBAT 2018), Antalya, Turkey
  5. 2018 Biyo-Aktif Polimerler ile Biyolojik Moleküllere Dayalı Tanı ve Tedavi Yöntemlerinin Ultra-Hızlı Biyoortogonal Tepkimelerle Geliştirilmesi 6. Ulusal Biyomühendislik Öğrenci Kongresi,İstanbul, 5-6 Nisan 2018

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Collaboration network

From the author lists of YÖKSİS publication records. Duplicate records of a work count once; institutions are co-authors’ current YÖKSİS affiliations.

Co-authors
35
With an akaturk profile
15
Turkish institutions
8
Co-authored works
%100

Academic co-authors 15

  1. ÖZAL MUTLU Doçent · Marmara Üniversitesi 13
  2. DİLEK BALIK Profesör · Yıldız Teknik Üniversitesi 12
  3. EMRAH SARIYER Doçent · Artvin Çoruh Üniversitesi 9
  4. ÖZKAN DANIŞ Profesör · Marmara Üniversitesi 7
  5. MURAT TOPUZOĞULLARI Doçent · Yıldız Teknik Üniversitesi 4
  6. OSMAN MUTLUHAN UĞUREL Doktor Öğretim Üyesi · İstanbul Üniversitesi-Cerrahpaşa 3
  7. AYŞEGÜL ERDEMİR Doçent · Yıldız Teknik Üniversitesi 2
  8. BELMA NURAL YAMAN Doçent · Eskişehir Osmangazi Üniversitesi 2
  9. CEM BÜLENT ÜSTÜNDAĞ Profesör · Yıldız Teknik Üniversitesi 2
  10. OĞUZ ATA Doçent · İstanbul Atlas Üniversitesi 2
Show all (15)
  1. EKREM AKBULUT Doçent · Malatya Turgut Özal Üniversitesi 1
  2. MUHAMMET ÜBEYDULLAH KAHVECİ Profesör · İstanbul Teknik Üniversitesi 1
  3. PELİN PELİT ARAYICI Öğretim Görevlisi (uygulamalı Birim) · Yıldız Teknik Üniversitesi 1
  4. SELCEN ARI YUKA Doktor Öğretim Üyesi · Yıldız Teknik Üniversitesi 1
  5. SONER ÇUBUK Profesör · Marmara Üniversitesi 1

National collaboration 8 institutions

  1. Marmara Üniversitesi 15 works · 3 academics
  2. Yıldız Teknik Üniversitesi 14 works · 6 academics
  3. Artvin Çoruh Üniversitesi 9 works · 1 academics
  4. İstanbul Üniversitesi-Cerrahpaşa 3 works · 1 academics
  5. Eskişehir Osmangazi Üniversitesi 2 works · 1 academics
  6. İstanbul Atlas Üniversitesi 2 works · 1 academics
  7. Malatya Turgut Özal Üniversitesi 1 works · 1 academics
  8. İstanbul Teknik Üniversitesi 1 works · 1 academics

Other co-authors (incl. international) 20

Erennur Uğurel 4Tuğba Gül İnci 3ANIL TEVFİK KOÇER 2BAŞAK YÜCE DURSUN 2Adelina-Gabriela NiculescuAlexandru Mihai GrumezescuAndrei-Mihai DumitrascuCan AygünCorneliu Ovidiu VrancianuEbru Cayir CengizEbru ÇayırEsra ALBAYRAKGÖZDE DEVECİM. R. MilwardMara Madalina MihaiMariana Carmen ChifiriucMihaela PaunP. R. CooperSafiye Merve BostanciogluSezen Spahi

Authors without an akaturk profile (international researchers, retired or former academics, students, clinicians) are grouped by name spelling; short forms such as “Gulluce M.” join the single full name they match.