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Academician

ZEYNEP İLKNUR KARADENİZ EROL

Doktor Öğretim Üyesi

Galatasaray Üniversitesi Mühendislik Ve Teknoloji Fakültesi Bilgisayar Mühendisliği Bölümü

Research topics OpenAlex
  1. Ana Dal Mühendislik Temel Alanı
  2. Yan Dal Bilgisayar Bilimleri ve Mühendisliği
Keywords YÖKSİS
Articles 5 YÖKSİS 5 · OpenAlex 0 Total citations 261 h-index 5 · OpenAlex OpenAlex coverage %100 matched 5 / 5 Q1 articles 3 Scopus · WoS Q1 3 Best field rank #66 / 162 Keyword · top 40.7% Co-authors 6 3 Turkish institutions

Citation impact

Citation counts of the articles matched in OpenAlex, citing publications from Crossref and the Stanford/Elsevier list. Sources are shown separately and never added up.

OpenAlex YÖKSİS articles matched in OpenAlex: 5 + YÖKSİS · co-author record: 1
h-index 5 Percentile in Türkiye: 60 #23 of 174 at their university by h-index
i10-index
5
Total citations
261
Top 21% in Türkiye
Per article
43.5
FWCI
1.31
1.00 = world average
World top 1%
0
World top 10%
1

Most cited articles

  1. PHISTO: pathogen–host interaction search tool 2013 world top 10% 184 citations
  2. Linking entities through an ontology using word embeddings and syntactic re-ranking 2019 37 citations
  3. Graph convolutional network based virus-human protein-protein interaction prediction for novel viruses 2022 17 citations
How is this computed?

h-index and citations are computed from the citation counts of this academic’s YÖKSİS articles matched in OpenAlex (not Google Scholar, WoS or Scopus). Unmatched articles are not included. 1 articles (0 citations) tagged with this academic’s YÖK author id in co-authors’ YÖKSİS records count only towards citations, h-index and i10; article counts, percentiles and rankings use their own YÖKSİS list. h-index on the OpenAlex author profile: 5.

Citing publications Crossref 70 publications citing 5 DOI-bearing articles · 8 Türkiye-affiliated
  • 2018 1
  • 2019 9
  • 2020 20
  • 2021 25
  • 2022 8
  • 2025 7
  1. Host–Microbe Interactions: Prospects of Machine Learning and Deep Learning Technologies in Animal Viral Disease Management TR Yiting Lu et al. · Veterinary Sciences · 2025
  2. Deep Learning and Machine Learning Usage in Cirrhosis Prediction: A Comparative Study TR Mustafa Bayram Gücen et al. · Black Sea Journal of Engineering and Science · 2025
  3. DOI 10.1093/nar/gkaf1307 2025
  4. DOI 10.1186/s13059-025-03854-6 2025
  5. DOI 10.1007/978-981-96-9760-1_18 2025
  6. DOI 10.1101/2025.11.03.686445 2025
  7. DOI 10.3390/v17111482 2025
  8. Artificial intelligence approaches to human-microbiome protein–protein interactions TR Hansaim Lim et al. · Current Opinion in Structural Biology · 2022
  9. DOI 10.1093/database/baac019 2022
  10. DOI 10.1101/2022.01.29.478279 2022
  11. DOI 10.1016/j.sbi.2022.102344 2022
  12. DOI 10.3390/pr10020291 2022
  13. DOI 10.1186/s12859-021-04511-y 2022
  14. DOI 10.3233/isb-210238 2022
  15. DOI 10.1016/j.isci.2022.103963 2022
  16. ML-AdVInfect: A Machine-Learning Based Adenoviral Infection Predictor TR Onur Can Karabulut et al. · Frontiers in Molecular Biosciences · 2021
  17. DOI 10.1016/j.imu.2020.100486 2021
  18. DOI 10.1101/2021.06.03.446973 2021
  19. DOI 10.1038/s41598-020-80549-x 2021
  20. DOI 10.3390/microorganisms9102014 2021
  21. DOI 10.1007/7355_2021_121 2021
  22. DOI 10.1039/d0cb00197j 2021
  23. DOI 10.1007/978-3-030-80418-3_27 2021
  24. DOI 10.1016/b978-0-12-801238-3.11607-1 2021
  25. DOI 10.1016/j.micpath.2021.105011 2021
  26. DOI 10.1101/2021.12.07.471296 2021
  27. DOI 10.1093/bib/bbab029 2021
  28. DOI 10.1007/978-3-030-89657-7_29 2021
  29. DOI 10.1016/j.compbiomed.2021.104889 2021
  30. DOI 10.1016/j.csbj.2021.09.017 2021

Showing the 30 most recent.

Where does this list come from?

Extracted from the reference lists in Crossref’s public March 2026 data file; 20.3% of the file has been processed, so the list may be incomplete. Crossref citations are never added to or compared with the OpenAlex citation counts; the two sources have different coverage.

Field ranking

Position in the main-field, side-field and keyword cohorts by YÖKSİS article score; each card opens that ranking.

YÖKSİS ?
Keyword rankings 3

Works 5

YÖKSİS and OpenAlex records: index distribution, journals published in, a filterable article list and the other output types.

Indexes and citation percentiles

?
TR Index 0 articles
OpenAlex citation percentile
Top 1%0
Top 10%1
Avg · n 5 %78.8
Other counts

Scopus (SJR)

  • YÖKSİS rows 4

WoS (JCR)

  • YÖKSİS rows 4

Articles

Articles with YÖKSİS and OpenAlex source split; narrow by quartile or TR Index.

5articles

Journals with publications

4 journals

Narrow down

Scopus (SJR)
Q13 Q21 Q30 Q40
WoS (JCR)
Q13 Q21 Q30 Q40
TR Index
0articles

Article list

  1. 2022 Graph convolutional network based virus-human protein-protein interaction prediction for novel viruses Computational Biology and Chemistry DOI 10.1016/j.compbiolchem.2022.107755 YÖKSİS SJR Q2 JCR Q2 OpenAlex 77.4%
  2. 2019 Linking entities through an ontology using word embeddings and syntactic re-ranking BMC Bioinformatics DOI 10.1186/s12859-019-2678-8 YÖKSİS SJR Q1 JCR Q1 OpenAlex 88.3%
  3. 2015 Literature Mining and Ontology based Analysis of Host-Brucella Gene–Gene Interaction Network Frontiers in Microbiology DOI 10.3389/fmicb.2015.01386 YÖKSİS SJR Q1 JCR Q1 OpenAlex 67.0%
  4. 2015 Detection and categorization of bacteria habitats using shallow linguistic analysis BMC Bioinformatics DOI 10.1186/1471-2105-16-S10-S5 YÖKSİS SJR Q1 JCR Q1 OpenAlex 68.7%
  5. 2013 PHISTO: pathogen–host interaction search tool Bioinformatics DOI 10.1093/bioinformatics/btt137 YÖKSİS OpenAlex top 10% OpenAlex 92.8%

Projects 2

  1. 2021 Türkmed: Türkçe Metinlerin Konusal / Duygusal Sınıflandırması Ve Kelimelerin Anlam Bulanıklıgını Gidermek için Difüzyon Ve Seq2seq-Füzyon Algoritmalarını içeren Özgün Makine Öğrenmesi Ve Derin Öğrenme Yöntemlerinin Gelistirilmesi -Tübitak 3501 · Tamamlandı 2021-02-15
  2. 2020 Derin Transfer Öğrenme Tabanlı Patojen-Konak Protein-Protein Etkileşim Tahmini TÜBİTAK PROJESİ · Tamamlandı 2020-10-01 – 2022-08-14

Proceedings 7 See all (7) →

  1. 2020 ISIKUN at the FinCausal 2020: Linguistically informed Machine-learning Approach for Causality Identification in Financial Documents COLING 2020, Proceedings of the 1st Joint Workshop on Financial Narrative Processing and MultiLing Financial Summarisation
  2. 2019 BOUN-ISIK Participation: An Unsupervised Approach for the Named Entity Normalization and Relation Extraction of Bacteria Biotopes EMNLP 2019, Proceedings of The 5th Workshop on BioNLP Open Shared Tasks
  3. 2026 GraphXtract: Adaptive Graph-Based Sentence Selection for Resource-Efficient Lay Summarization with Large Language Models Proceedings of the 17th ACM International Conference on Bioinformatics, Computational Biology and Health Informatics
  4. — MetninOzU at BioLaySumm2025: Text Summarization with Reverse Data Augmentation and Injecting Salient Sentences ACL 2025 - Proceedings of the 24th Workshop on Biomedical Language Processing (Shared Tasks)
  5. 2021 Protein Interaction Prediction on PHI Networks Using Graph Convolution Networks SİU 2021, 2021 29th Signal Processing and Communications Applications Conference (SIU)

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Collaboration network

From the author lists of YÖKSİS publication records. Duplicate records of a work count once; institutions are co-authors’ current YÖKSİS affiliations.

Co-authors
6
With an akaturk profile
3
Turkish institutions
3
Co-authored works
%100

Academic co-authors 3

  1. ARZUCAN ÖZGÜR TÜRKMEN Profesör · Boğaziçi Üniversitesi 4
  2. FATİH ERDOĞAN SEVİLGEN Profesör · Fatih Sultan Mehmet Vakıf Üniversitesi 1
  3. FERDA ABBASOĞLU Araştırma Görevlisi · Gebze Teknik Üniversitesi 1

National collaboration 3 institutions

  1. Boğaziçi Üniversitesi 4 works · 1 academics
  2. Fatih Sultan Mehmet Vakıf Üniversitesi 1 works · 1 academics
  3. Gebze Teknik Üniversitesi 1 works · 1 academics

Other co-authors (incl. international) 3

Esmaeil NouraniMehmet Burak KocaSALİHA DURMUŞ

Authors without an akaturk profile (international researchers, retired or former academics, students, clinicians) are grouped by name spelling; short forms such as “Gulluce M.” join the single full name they match.